//
// Manta - Structural Variant and Indel Caller
// Copyright (c) 2013-2019 Illumina, Inc.
//
// This program is free software: you can redistribute it and/or modify
// it under the terms of the GNU General Public License as published by
// the Free Software Foundation, either version 3 of the License, or
// at your option) any later version.
//
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
// GNU General Public License for more details.
//
// You should have received a copy of the GNU General Public License
// along with this program.  If not, see <http://www.gnu.org/licenses/>.
//
//

/// \file
/// \author Chris Saunders and Xiaoyu Chen
///

#pragma once

#include "manta/SVScoreInfo.hpp"
#include "manta/SVScoreInfoDiploid.hpp"
#include "manta/SVScoreInfoRna.hpp"
#include "manta/SVScoreInfoSomatic.hpp"
#include "manta/SVScoreInfoTumor.hpp"

/// All scoring info for one sv candidate, including data related to specific scoring models
///
struct SVModelScoreInfo {
  void setSampleCount(const unsigned sampleCount, const unsigned diploidSampleCount)
  {
    base.setSampleCount(sampleCount);
    diploid.setSampleCount(diploidSampleCount);
  }

  void clear()
  {
    base.clear();
    diploid.clear();
    somatic.clear();
    tumor.clear();
    rna.clear();
  }

  SVScoreInfo        base;
  SVScoreInfoDiploid diploid;
  SVScoreInfoRna     rna;
  SVScoreInfoSomatic somatic;
  SVScoreInfoTumor   tumor;
};
